1. Reposi�rio Institucional do Incaper
  2. Biblioteca Rui Tendinha
  3. Memória Técnica do Incaper
Use este identificador para citar ou linkar para este item: http://biblioteca.incaper.es.gov.br/digital/handle/123456789/3593
Registro completo de metadados
Campo DCValorIdioma
dc.contributor.authorPERON, F. N.
dc.contributor.authorCALLONI, R.
dc.contributor.authorVENTURA, J. A.
dc.contributor.authorFERNANDES, P. M. B.
dc.contributor.otherUFES; UFGRS; Jose Aires Ventura, Incaper; UFES.
dc.date.accessioned2019-06-24T12:34:09Z-
dc.date.available2019-06-24T12:34:09Z-
dc.date.created2019
dc.date.issued2019-06-24
dc.identifier.other22610
dc.identifier.urihttp://biblioteca.incaper.es.gov.br/digital/handle/123456789/3593-
dc.descriptionMealybug wilt of pineapple (MWP) is a disease caused by the Pineapple mealybug wilt-associated virus (PMWaV) complex transmitted by Dysmicoccus brevipes and D. neobrevipes. MWP symptoms are characterized by root dessication, leaf wilting and consequent failure to produce a fruit. The molecular mechanisms involved in the pineapple-PMWaV interaction for MWP symptomatology are still unclear. In this work, mRNAs of asymptomatic and symptomatic pineapple plants were evaluated using Illumina RNA sequencing technology. From a total of 79 million reads per sample, 16,097 genes were identified using STAR aligner and HTseq for paired-end files. Differentially expressed genes (DEGs) between the evaluated groups were estimated using DESeq2 and edgeR, with an FDR cutoff of ≤0.05. A total of 207 DEGs were detected, with 61 upregulated and 146 downregulated in symptomatic plants infected by PMWaV-2. The methodologies improved by the assays presented in this article and the detected DEGs can substantiate further researches with pineapple and the MWP disease.
dc.languagept_BR
dc.publisherActa Horticulturae, 1239, p. 177-184, 2019.
dc.subjectAbacaxi
dc.titleBioinformatics approach to the study of the molecular behaviour of mealybug wilt of pineapple.
dc.type--
dc.ainfo.id21431
dc.ainfo.lastupdate2019-06-24
dc.ainfo.depositanteMerielem Frasson
dc.subject.nalthesaurusBioinformatics
dc.subject.nalthesaurusPineapple
dc.subject.nalthesaurusTranscriptomic
dc.subject.nalthesaurusPMWaV
dc.subject.nalthesaurusSTAR
dc.subject.nalthesaurusDESeq2
dc.subject.nalthesaurusEdgeR
dc.identifier.doi10.17660/ActaHortic.2019.1239.22
Aparece nas coleções:Memória Técnica do Incaper

Arquivos associados a este item:
Arquivo Descrição TamanhoFormato 
Bioinformatics-approach-to-the-molecular-study-Mealybug-wilt-pineapple-2019.pdf465,2 kBAdobe PDFVisualizar/Abrir
Mostrar registro simples do item Visualizar estatísticas


Os itens no repositório estão protegidos por copyright, com todos os direitos reservados, salvo quando é indicado o contrário.